PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161316.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 225aa    MW: 25595.8 Da    PI: 10.253
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.98.8e-12104145351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_019161316.1 104 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 145
                     79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVSLRRRRLL GLCSGRSSFI VPFPKFPENG SMPGNYMQNT KPVGSVFSKP SMDVDQLKEE  60
TTALGTSSFS ASPPSKEQEN AKFPVKRRKW HRRKHFDNQE PCLMRGVYFK NMKWQAAIKV  120
DKKQIHLGTV GSQEEAARLY DRAAFMCGRE PNFELSEEEK QELRKFNWDE FLAMTRSAIT  180
SKKTRRRSGV GARRKSESSP QNSEEGEQQG NGFSASDDAD QDTSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-49ERF family protein