PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160703.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 287aa    MW: 32307.2 Da    PI: 6.7041
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.82e-40191511128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskr.dkkyatgkrknratksgyWk.atgkdkev 92 
                     lppGfrF+Pt++e+v +yL++k+ + +l++ +vi+e+ +i++++Pw+Lp  +  e+++ yfFs++ ++ky++g++++r+ ++gyWk ++ ++k++
  XP_019160703.1  19 LPPGFRFQPTEQEIVFQYLQRKTFSLSLPA-SVISELpNICRYDPWNLPGDM--EQEDRYFFSSKeATKYPNGDQTSRVSSNGYWKpSSSEEKHI 110
                     79****************************.89***99***********766..5567788876516799****************444557888 PP

             NAM  93 lskkgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +++      +g+kktLvfy g+ p+g+kt+W+mheyrl
  XP_019160703.1 111 TCPGKSSsipmiMGMKKTLVFYYGKPPHGSKTNWIMHEYRL 151
                     887555468888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDGRLRLHFV RDDGKVVKLP PGFRFQPTEQ EIVFQYLQRK TFSLSLPASV ISELPNICRY  60
DPWNLPGDME QEDRYFFSSK EATKYPNGDQ TSRVSSNGYW KPSSSEEKHI TCPGKSSSIP  120
MIMGMKKTLV FYYGKPPHGS KTNWIMHEYR LVAISPAGNP PLPPYFLHAK KDYSQGSLMQ  180
QIGNLVICHV FQKKRVNGKA GEESAEVCGD NINISINEGE NIVDNAEQQL FERYNLMMRD  240
GLSSSSCSDD GDSCVSSCSS SRVLNDEVSS SHSCGTWYGN HQDANYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-53NAC family protein