PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160058.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 306aa    MW: 34194.6 Da    PI: 5.6392
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.2e-11701313299
                     --SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      ++ ++l de+gr+ e k+ ++k++    l++GW++F  +++L  gD+vvF+l++    +l+v ++r+
  XP_019160058.1  70 HDTAIILVDENGRETETKYLIEKHG----LSGGWRGFSLQHNLVPGDVVVFQLIQ--PLKLKVYIVRA 131
                     55689**************777777....***********************997..77788988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MNPLAANKKV IKRRSPTPKK VQAKGEGCRR EYGCVDENSI AMRRGRELQA NLSPQFPSIS  60
ALVTCHLPNH DTAIILVDEN GRETETKYLI EKHGLSGGWR GFSLQHNLVP GDVVVFQLIQ  120
PLKLKVYIVR ANDSANIAGA ISLLDLSHYA HPIATEGLLL EGDDIEENVL RIEDAADQLT  180
RIQHEGDNLE RQVSTSDHLS AENVVEFSQV KNFEDFKVVV NNINIDSEIS EDTRLKYYEM  240
CRSRNAYRHE LEEPGLNYTL IAGAITETVK IADGIKASTL ATGRDVLEVW DRTLIGVLAR  300
QDKRAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-24B3 family protein