PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 176aa MW: 19646.5 Da PI: 9.065 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00085 | 45 | 67 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k F++ L H +H XP_019159845.1 45 FECKTCQKKFKSFQALGGHRASH 67 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.0003 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L +H+r+H XP_019159845.1 84 HECPVCGLEFGLGQALGVHMRKH 106 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MTLKRSREEV AAGAEAMAMA NCLELLSRPA GGGGGEKTPP SEWEFECKTC QKKFKSFQAL 60 GGHRASHKRP KIDNNNVVNI KKRHECPVCG LEFGLGQALG VHMRKHRSDQ SHSDDKKSKS 120 PDLLTVTTVK NEEHSADDGI KKKEKQQVLF DLNFTLLEND SIVHRRLVPI TLDLFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 7e-23 | C2H2 family protein |