PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019159234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 28966.7 Da PI: 8.4517 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.8 | 5.2e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaevaviifss+gklye+ XP_019159234.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 101.7 | 1e-33 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e++++++++e+ kLk+++e+Lqr+qRhllGedL++Ls+keLq+Le+qLe++l + R+kK++++le++eel++ke+ l++ nk+L++k+ XP_019159234.1 82 SIERETQNWSHEVIKLKAKYESLQRTQRHLLGEDLGPLSIKELQNLEKQLENALAQTRQKKTQVMLEHMEELRRKERHLDDVNKQLKTKV 171 457789*********************************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVAVIIFSS RGKLYEFGSS 60 SYGITKTLER YENCSFNPQE NSIERETQNW SHEVIKLKAK YESLQRTQRH LLGEDLGPLS 120 IKELQNLEKQ LENALAQTRQ KKTQVMLEHM EELRRKERHL DDVNKQLKTK VSLELSSLEA 180 AEGQGLGALL CPWNSSNASA STSSFPVQHS QPNHMDFSLE PVLQIGYPHY MAGEGSSGNR 240 NMAVESDIYH GWNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45650.1 | 4e-95 | MIKC_MADS family protein |