PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019158338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 132aa MW: 15065.1 Da PI: 8.8642 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16 | 2.1e-05 | 46 | 85 | 2 | 45 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45 + + erE++ Rd +N f+eL ++l ++ ++ Ka iL+ XP_019158338.1 46 KIHKAEREKQKRDSMNVLFAELAKVLDPS----HQNYGKACILK 85 667889*****************999775....45555555555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 132 aa Download sequence |
MDSEASTAIN DCAVHVVSSS SKRKHDKAPR KIHEAEREPS NKFPRKIHKA EREKQKRDSM 60 NVLFAELAKV LDPSHQNYGK ACILKETMPL VRELIVQVDN LRKENAALNS ESHYMSVEKD 120 EIRRKDCAGN PD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G47640.2 | 2e-19 | bHLH family protein |