PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158197.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 254aa    MW: 29636.3 Da    PI: 10.1057
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.61.7e-34121296129
             NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                     rFhP+deel  + L +k+ ++++++  +i e+d+ k++Pwd+p  ++++e+++w+fFs+rd  +       rat+sgyWk+tgkd+++++ +++l
  XP_019158197.1  12 RFHPSDEELS-HILWRKMGDSSFSA-PAIGEADLRKLDPWDFPgVSLQGERRKWFFFSPRDWMNG----IFRATSSGYWKTTGKDTQIFK-GKAL 99 
                     9********8.99*********999.78***************778888889********99864....799******************.99** PP

             NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
                      g+k+t+vfy+gr pk +kt+W+mheyrle
  XP_019158197.1 100 LGMKRTMVFYQGRIPKITKTNWLMHEYRLE 129
                     ****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDSSKIPPSE RRFHPSDEEL SHILWRKMGD SSFSAPAIGE ADLRKLDPWD FPGVSLQGER  60
RKWFFFSPRD WMNGIFRATS SGYWKTTGKD TQIFKGKALL GMKRTMVFYQ GRIPKITKTN  120
WLMHEYRLES NHEWVICKVF LENKISGISS SNNSEESRPH PMMQTNVVLS TQFLVKLKYK  180
KDTVKFVLNN PTLDGLKAQV LKRFNKLEID GLEFKYRDLH GRMISMVCDE DLKYRLRCLK  240
ACGEIEVRLS LVSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-46NAC family protein