PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019157111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 92aa MW: 10307.7 Da PI: 10.0252 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.1 | 1.3e-07 | 23 | 59 | 18 | 54 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + ++L++llP++ + +s K s +L+++++YI++L XP_019157111.1 23 QLVSKLQQLLPELRSRRSAKASAGKVLQETCNYIRNL 59 56689*******779********************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 92 aa Download sequence |
MSSRRSRQSS SASSRISDDQ IIQLVSKLQQ LLPELRSRRS AKASAGKVLQ ETCNYIRNLH 60 KEVDDLSDRL SHLLSTIDAD TPEAAIIRSL IM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G26945.1 | 6e-24 | bHLH family protein |