PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157081.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 207aa    MW: 23926 Da    PI: 7.5319
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-05118138323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C++Cgk+F +   L+ H++ H
  XP_019157081.1 118 CKKCGKVFDTIRALNGHMQIH 138
                     ******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MVFREEEEEE AEEQKFICKF CNKVCLSGRS LGGHMRGHLH LIAAAKKQRT KADQNSVQSR  60
SAKIREKGKS MVLGEDDGLT ENPNKSWKVF YSNHRGLERE NLSDHQRRYE EEEEHHLCKK  120
CGKVFDTIRA LNGHMQIHSK RSRLSREESM ESLSDMENQC PVQKKRSAIR YGVTENSPFS  180
SVASDLEEAA VCLMMLSRGF QEWDFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-09C2H2 family protein