PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156467.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 275aa MW: 30572.3 Da PI: 5.9122

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.9	1.9e-27	13	143	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkdk 90 pG F P+de+lv +yL k +g+++ ++vik++++y+++P +Lp+ ++ + + +w+ F+ r+ k +r +r + gyWk g + XP_019156467.1 13 LPGSGFYPSDEQLVGYYLSLKNDGDRHGGTNVIKDINLYNFDPFNLPEtfrfRFGRGGRrlHWFCFVVRALK----DRGTRRAGGGYWKRRGGVR 103 5899********************99999***********96466644455562355555555554....466777799****** PP NAM 91 evlsk..kgelvglkktLvfykgrapk.gektdWvmheyr 127 v+++ ++++vg++k +vfy g++pk +++tdW+m ey+ XP_019156467.1 104 VVVDRslGKAVVGTRKCFVFYFGDSPKtAVRTDWFMYEYE 143 99999999*******997666167*******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGDVNKDTTS FALPGSGFYP SDEQLVGYYL SLKNDGDRHG GTNVIKDINL YNFDPFNLPE 60 TFRFRFGRGG RRLHWFCFVV RALKDRGTRR AGGGYWKRRG GVRVVVDRSL GKAVVGTRKC 120 FVFYFGDSPK TAVRTDWFMY EYEQPNHPTA AFVLCRIFSK SHHGNNLSEN MVSSCAEESV 180 ATVRHIGIQC NGTATSATDE KMQDEKNEVL NFPVDTVSKI DNHVSEPIGD QMRSTGLVST 240 GATFIEALAA EEELGILEGD FLELDDLVCP LLGGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	2e-18	NAC family protein