PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019156248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 205aa MW: 23549 Da PI: 10.1557 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqv+fskRr g+lKKA+ELSvLCdae+ +i+fs+tgklye+ss XP_019156248.1 9 KRIENATSRQVSFSKRRRGLLKKAFELSVLCDAEITLIVFSPTGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 63.8 | 6.3e-22 | 83 | 173 | 9 | 98 |
K-box 9 leeakaeslqqe.lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e+ ++ +++ +a + k++e L++++R+llGe+L+s+s+ +L+q+++qL sl++iR++K+ l ++qi++l++kek l+een +L+k+l XP_019156248.1 83 SSETSLQHVKEDgVAAMSKRVEVLEQSKRKLLGEGLDSCSIDDLHQIQEQLVISLRNIRERKSLLCKQQIDRLREKEKILEEENAELKKRL 173 4555556655543899************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MVRGKTELKR IENATSRQVS FSKRRRGLLK KAFELSVLCD AEITLIVFSP TGKLYEFSST 60 SSSNKTIQRY MNNAKNLGQY KKSSETSLQH VKEDGVAAMS KRVEVLEQSK RKLLGEGLDS 120 CSIDDLHQIQ EQLVISLRNI RERKSLLCKQ QIDRLREKEK ILEEENAELK KRLAVSEPQR 180 LYTDVETRLF IGQPETRPPA GDHNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-58 | MIKC_MADS family protein |