PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019156067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 157aa MW: 17954.7 Da PI: 10.4281 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.9e-11 | 28 | 76 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L k ++Y++sLq XP_019156067.1 28 NSHSLAERVRREKISERMRLLQELVPGC----NKIAGKAVMLDKIIKYVQSLQ 76 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MKHKTRQNDS ARKENYVHVR AKRGQATNSH SLAERVRREK ISERMRLLQE LVPGCNKIAG 60 KAVMLDKIIK YVQSLQQQVE FLSMKLATVN PEMNLDVEQI LPKDIFLPGL NIPHRSFTCI 120 PGSTPLHALP QNVWDNDLQS ILQKGFDSMS NRGPNDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10120.1 | 9e-62 | bHLH family protein |