PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019155741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 235aa MW: 25975.8 Da PI: 5.1697 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 120.3 | 2.3e-37 | 27 | 112 | 2 | 85 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasns 85 a+k+++++++h kv+gR+RR+R++a caar+F+L++eLG+++d++ti+WLlqqa+pai ++tgt++++as+ + s+s++ + XP_019155741.1 27 APKRSSNKDRHKKVDGRGRRIRMPAMCAARIFQLTRELGHKTDGETIQWLLQQAEPAIMAATGTGTIPASALavaA-AGGSVSEQGN 112 89*******************************************************************8876632.3333333322 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 235 aa Download sequence |
MGENKAAEMK LKSPAESKEQ EERKQEAPKR SSNKDRHKKV DGRGRRIRMP AMCAARIFQL 60 TRELGHKTDG ETIQWLLQQA EPAIMAATGT GTIPASALAV AAAGGSVSEQ GNSVSVLNLN 120 SRLDEFGGII TSDWRPQMPP DDGAWSFVQN SSCELGNQIL NSNPRLGFHG FEFPNPESFS 180 QEDLPGLELG LSQEGRYGTI NFQSLPQFYQ RMGQTENPMN HNQDSQVDDD GQDRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G27010.1 | 7e-52 | TCP family protein |