PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155720.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 206aa MW: 22704.5 Da PI: 8.6235

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.1	3.7e-45	7	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pGfrFhPtdeel+v+yL++kv +++l++ vi e+ ++++++Pw+Lp +++ e yfFs+r+ k +g+r +rat sgyWkatg+dk++ + XP_019155720.1 7 LLPGFRFHPTDEELIVHYLNPKVLNSPLPA-AVILEIdNVCQSDPWNLP---GGSDGERYFFSSREVKDGSGNRCSRATLSGYWKATGNDKKIAA 97 579*************************.77888868******...4467799*******************************9 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++g++ktL+fykg+ ++++ktdW+mheyrl XP_019155720.1 98 SgeAQRVIGIRKTLAFYKGKPSNSSKTDWIMHEYRL 133 9666667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MENLNFLLPG FRFHPTDEEL IVHYLNPKVL NSPLPAAVIL EIDNVCQSDP WNLPGGSDGE 60 RYFFSSREVK DGSGNRCSRA TLSGYWKATG NDKKIAASGE AQRVIGIRKT LAFYKGKPSN 120 SSKTDWIMHE YRLADAPQAN LVLCRIFFKK RGGEKSRAAS VIPAFRDFFA AERADLNLAL 180 ASSSSSHSSS VSDHHEATSC SSFKGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	7e-64	NAC family protein