PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019155111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29242.4 Da PI: 7.9219 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.6 | 1.1e-44 | 7 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppG+rF Pt+eelv++yL++k++g + e+++vi+ v+iy+++PwdLp+ +++ ++w+fF++r+ ++a+g r++r t++gyWkatg+ XP_019155111.1 7 LPPGYRFYPTEEELVSFYLRNKLQGARQEIHTVIPVVNIYDFNPWDLPQlagqYSRSDPEQWFFFIPRQDREARGGRPTRLTAEGYWKATGSPGC 101 79****************************999**************9655643344666*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++ vg k+t+vfy+grap+g+kt+W m+eyr+ XP_019155111.1 102 VYSVNNRIVGGKRTMVFYRGRAPSGRKTEWKMNEYRA 138 ***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSAESDLPPG YRFYPTEEEL VSFYLRNKLQ GARQEIHTVI PVVNIYDFNP WDLPQLAGQY 60 SRSDPEQWFF FIPRQDREAR GGRPTRLTAE GYWKATGSPG CVYSVNNRIV GGKRTMVFYR 120 GRAPSGRKTE WKMNEYRAIE EEASASSITN SANLKLHQEF SLCRAYKRAK CVRAFDRRPT 180 SSSPAITAAA FQPSPPQAAY YNQAASTSQQ NTAPPLPPPA GDYQRSSSSS GGDPDGGLDF 240 PPYGFSWDEF DELHCLLGNA Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-74 | NAC family protein |