PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019154920.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 576aa MW: 64805.3 Da PI: 4.6909

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019154920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.4e-52	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLkk++ ++++ + +vi e+d+yk++P dLp +k+k++++ w+fFs+rd+ky++g r+nratk+gyWkatgkd++++ XP_019154920.1 13 LPPGFRFHPTDEELVLYYLKKRICRRRILT-DVIGETDVYKWDPDDLPelSKLKTGDRLWFFFSPRDRKYPNGGRTNRATKHGYWKATGKDRTIT 106 79***********************988.99**********954499999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLvfykgrap+ge+tdWvmhey++ XP_019154920.1 107 C-NSRDVGVKKTLVFYKGRAPTGERTDWVMHEYTM 140 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MVMAKQGFPD QRLPPGFRFH PTDEELVLYY LKKRICRRRI LTDVIGETDV YKWDPDDLPE 60 LSKLKTGDRL WFFFSPRDRK YPNGGRTNRA TKHGYWKATG KDRTITCNSR DVGVKKTLVF 120 YKGRAPTGER TDWVMHEYTM DEMELSRCQS AQDYYALYKL FKKSGPGPKN GEQYGAPFNE 180 EDWADDECVG TNLHVEQEKS RKNVNDVGLI DDPKPNDVLP DLPPPIDGLE EFLKHIADEP 240 SLTELLPVDN SYVDKEDTAS ALLDHPAGEV YLPVQTATLF SVPPLHNEQA NFDPIHSVTL 300 QPQLHEATEV TSAPVNEWNP KVVEEDFLED FLEMNDLDGS ELSVNQNFDK PVENLGSQQF 360 VDFDGLNEFE LYQDSAMFLH DMGAIGVGQG TEQAANHVAN GIINPLYTDF GDQMINNQQL 420 YLNEGNEFNH QLWSHDLRCS TVNPTEASQS ANLPLTSGVV YGNHLENHPV GANLNQNNIQ 480 DDATNSSFSS ALWAFMESIP ATPASAAESV LVNKAFERMS SFRRLRLNAR NVKVASGNTS 540 ATSRRSGKSK NGLYRLFCFS LLGLLCAILW MFIGAS

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MVMAKQGFPD QRLPPGFRFH PTDEELVLYY LKKRICRRRI LTDVIGETDV YKWDPDDLPE  60
LSKLKTGDRL WFFFSPRDRK YPNGGRTNRA TKHGYWKATG KDRTITCNSR DVGVKKTLVF  120
YKGRAPTGER TDWVMHEYTM DEMELSRCQS AQDYYALYKL FKKSGPGPKN GEQYGAPFNE  180
EDWADDECVG TNLHVEQEKS RKNVNDVGLI DDPKPNDVLP DLPPPIDGLE EFLKHIADEP  240
SLTELLPVDN SYVDKEDTAS ALLDHPAGEV YLPVQTATLF SVPPLHNEQA NFDPIHSVTL  300
QPQLHEATEV TSAPVNEWNP KVVEEDFLED FLEMNDLDGS ELSVNQNFDK PVENLGSQQF  360
VDFDGLNEFE LYQDSAMFLH DMGAIGVGQG TEQAANHVAN GIINPLYTDF GDQMINNQQL  420
YLNEGNEFNH QLWSHDLRCS TVNPTEASQS ANLPLTSGVV YGNHLENHPV GANLNQNNIQ  480
DDATNSSFSS ALWAFMESIP ATPASAAESV LVNKAFERMS SFRRLRLNAR NVKVASGNTS  540
ATSRRSGKSK NGLYRLFCFS LLGLLCAILW MFIGAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-129	NAC family protein