PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019154917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26602.5 Da PI: 9.8102 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 7.8e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev ++ifsstgklye++s XP_019154917.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 85.4 | 1.2e-28 | 76 | 171 | 4 | 99 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s++ + ++++ + +q+e+++L+ke+++Lq+++R+l+Ge+L Ls+k+Lq+Le++L+ slk iR+kK+++l+++i+el +k +q+en +L kk+ XP_019154917.1 76 SQQLQDSASELKFWQREATNLRKELHSLQQNHRQLMGEELYGLSVKDLQNLENKLDMSLKGIRAKKEQILINEIQELTRKGTIIQQENLELYKKV 170 33333688899*********************************************************************************998 PP K-box 99 e 99 + XP_019154917.1 171 K 171 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKIPIRR IDNTTSRQVT FSKRRNGLLK KAKELAILCD AEVGLVIFSS TGKLYEFAST 60 SMKAIMEGYN KTKEQSQQLQ DSASELKFWQ REATNLRKEL HSLQQNHRQL MGEELYGLSV 120 KDLQNLENKL DMSLKGIRAK KEQILINEIQ ELTRKGTIIQ QENLELYKKV KLIQQENLEL 180 YKQAYGKRDP DGAVTKNTTD FTLCRDSLSP MHLQLSCQPQ NFDVMSRASD SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-93 | MIKC_MADS family protein |