PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019154240.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 318aa    MW: 36885.4 Da    PI: 4.6726
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019154240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-151193188
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88
                    ffk +tp+ ++++  + +p   +++++g+k  ++t+ l+d+  + Wevk+   +++++ v+++GW +F k+n ++ gDf+vF + ++ s
  XP_019154240.1 11 FFKLFTPETSSQK--MEMPPA-VSAYMGDK-LPRTVFLRDRYKNMWEVKV--GRSGNHLVFEEGWDKFIKDNCVELGDFLVFDYLDTkS 93
                    7888866555554..677765.55886664.899****************..*******************************987634 PP
2B341.72e-132222971088
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                      ++++ l +p   ++++++k   + t++l+d++g+ We k++ +k + r+vlt+GW+  +k n ++e D+++ +++ ++
  XP_019154240.1 222 KGRKNELHIPEYVIRHFNLK--LPSTMILRDPKGKDWEAKVNPWKDG-RVVLTGGWNALCKWNLIREEDSCICEFVTEE 297
                     5677889***9999888888..7779***************777774.89**********************9977544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDGSNKKTKG FFKLFTPETS SQKMEMPPAV SAYMGDKLPR TVFLRDRYKN MWEVKVGRSG  60
NHLVFEEGWD KFIKDNCVEL GDFLVFDYLD TKSLFDFKLL GLSCCCEKIG VGRPNFLVKE  120
EVEWEHSDSL EEDEEEEEEG DPSYHTTINE NNMSEDDEYE FAEVEVEEEE EDGDGDGESR  180
IEAAPRRNHH KRKAFDYTGA SIFESGLYPQ PINPYFVAKN RKGRKNELHI PEYVIRHFNL  240
KLPSTMILRD PKGKDWEAKV NPWKDGRVVL TGGWNALCKW NLIREEDSCI CEFVTEERGM  300
GRKELLLQIQ VVRGSHQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.13e-14B3 family protein