PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019153710.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 681aa MW: 73305.6 Da PI: 6.6496

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019153710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	403	440	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_019153710.1 403 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 440 554459******************************88 PP
2	BELL	112.7	2e-36	266	337	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+++vis Fe++ag gsa+ Yt++Al++iS++FrcLkdai +q+ XP_019153710.1 266 ERQEIQMKKAKLVNMLDEVEQRYRQYHQQMHIVISWFEQAAGPGSARTYTAVALQTISKQFRCLKDAILGQV 337 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MATYFHGNSE IQGGGDGLQT LILMNPAGYV NVGFSDTQPA AGTNFAFLNS ITSGGNAVTL 60 SHAPPPPSQS QQFVGIPLAT AAGSHQEAHA SAVHSQQHDI TALHGFIRSQ YNNNMYGPPP 120 SSVELSAARE VTRAQGGLSL SLSSSQHGNF RPEGEAGSTQ QMVTAAISPT SGADDQVRVS 180 GGSCSSASAV SNGAQSRILS SKYLKAAQEL LEEVVNVGKG IKTGPESSAK GANSQAKSIA 240 GDSSGEGQAG VESSSGNRTT ELTTAERQEI QMKKAKLVNM LDEVEQRYRQ YHQQMHIVIS 300 WFEQAAGPGS ARTYTAVALQ TISKQFRCLK DAILGQVRAA SKSLGEEGVG MKVEGSSSRL 360 KMVDNQLRQQ RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFEHFLHPY PKDSDKIMLA 420 KQTGLTRSQV SNWFINARVR LWKPMVEEMY LEEIKEQEKS GGGAEDKTSK EEADEEEEGS 480 ASLQHKTPPG SENQDRNNDN PVMSTAASTS ITGITMNANH PGFNLIGPSE MESITQGSPK 540 KPRGGSDMPA LMKFGNDRQN REGFPLVEGS TNFMAAFGSY PMEQMGRFTT EQFPPPYSTN 600 AVSLTLGLQH SENLSAAMSA THHNFLPNQM GRGVVIGEAE ANDFVAGMTT PTSAHPTSVF 660 DNFNIQNRKR FPAQLLPDFV T

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MATYFHGNSE IQGGGDGLQT LILMNPAGYV NVGFSDTQPA AGTNFAFLNS ITSGGNAVTL  60
SHAPPPPSQS QQFVGIPLAT AAGSHQEAHA SAVHSQQHDI TALHGFIRSQ YNNNMYGPPP  120
SSVELSAARE VTRAQGGLSL SLSSSQHGNF RPEGEAGSTQ QMVTAAISPT SGADDQVRVS  180
GGSCSSASAV SNGAQSRILS SKYLKAAQEL LEEVVNVGKG IKTGPESSAK GANSQAKSIA  240
GDSSGEGQAG VESSSGNRTT ELTTAERQEI QMKKAKLVNM LDEVEQRYRQ YHQQMHIVIS  300
WFEQAAGPGS ARTYTAVALQ TISKQFRCLK DAILGQVRAA SKSLGEEGVG MKVEGSSSRL  360
KMVDNQLRQQ RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFEHFLHPY PKDSDKIMLA  420
KQTGLTRSQV SNWFINARVR LWKPMVEEMY LEEIKEQEKS GGGAEDKTSK EEADEEEEGS  480
ASLQHKTPPG SENQDRNNDN PVMSTAASTS ITGITMNANH PGFNLIGPSE MESITQGSPK  540
KPRGGSDMPA LMKFGNDRQN REGFPLVEGS TNFMAAFGSY PMEQMGRFTT EQFPPPYSTN  600
AVSLTLGLQH SENLSAAMSA THHNFLPNQM GRGVVIGEAE ANDFVAGMTT PTSAHPTSVF  660
DNFNIQNRKR FPAQLLPDFV T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-130	TALE family protein