PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019152302.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 330aa MW: 37040.8 Da PI: 6.772

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019152302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.2	7.7e-54	13	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++ + +i evd++kvePw+Lp k + +ekewyfF+ rdkky+tg r+nrat+sgyWkatgkdke+++ XP_019152302.1 13 LPPGFRFHPTDEELITHYLSNKVLDTSFCA-VAIGEVDMNKVEPWELPWKSRIGEKEWYFFCVRDKKYPTGMRTNRATASGYWKATGKDKEIFR- 105 79***********************888.67***********888889************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg+kktLvfy+grapkgekt+Wv he+rle XP_019152302.1 106 GKCLVGMKKTLVFYQGRAPKGEKTNWVCHEFRLE 139 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MENLPGPDHQ MELPPGFRFH PTDEELITHY LSNKVLDTSF CAVAIGEVDM NKVEPWELPW 60 KSRIGEKEWY FFCVRDKKYP TGMRTNRATA SGYWKATGKD KEIFRGKCLV GMKKTLVFYQ 120 GRAPKGEKTN WVCHEFRLEG KLSLPNFPNA TQSDWVICRV FHKNSCGKNV HFSGLTDTKS 180 SVLPPLTDSS TPPESGHVTC FSSLIPPENK SLQQESVSMM NYLSPLPSSS TADKAIDISP 240 HPQNVFPWSQ AAGSSFLNQD SFPIQDPAIL RSLLAGCGHR SFKTEKEIVC GSQETTEISS 300 VVSNLEMGGR RSSSFDDQQN PQELDCLWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-109	NAC family protein