PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019152292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 243aa MW: 26024.6 Da PI: 6.8309 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.8 | 2.6e-33 | 62 | 118 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +++rY+eClkNhA+ +GghavDGCgEfmp+ ge+gt +alkCaACgCHRnFHR+e+e XP_019152292.1 62 TRYRYRECLKNHAVGIGGHAVDGCGEFMPA-GEDGTLDALKCAACGCHRNFHRKEEEG 118 5789*************************9.999********************9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MDFDEEQEEE IGMHEMEAEG NYPPLGSSGM GGGEEVVGGR KNGVGGGGGG GGGGGGGGGG 60 TTRYRYRECL KNHAVGIGGH AVDGCGEFMP AGEDGTLDAL KCAACGCHRN FHRKEEEGDG 120 LGHFHHHPHL THYPSFRPSG YLHVAPHRPL ALPSTSRDDD VSNPSSSGGG GGEGGSGGSK 180 KRFRTKFSQE QKDKMLAFAE RLEWRIQKHD EEAVQEFCAT TNVRRQVFKV WMHNNKHTLG 240 KKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-69 | ZF-HD family protein |