PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019151585.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 641aa MW: 69333 Da PI: 6.5085

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019151585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.1e-09	401	438	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_019151585.1 401 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 438 554459******************************88 PP
2	BELL	117.5	6.2e-38	265	333	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k+kLl++leeVd+rYk+y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcLkd i+ qi XP_019151585.1 265 ELQKRKTKLLQMLEEVDRRYKHYCDQMKAVVSSFEAVAGNGAATVYSALASKAMSRHFRCLKDGIVAQI 333 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MLCMAGQGEE KTRSAMVTTT GYWYADAPTN NPQIHQIHQT FDPNPEIYNL TTGMEMIGWK 60 SFFNKGAGAG AGGPGPSSSK IGLSGEPSTS HEFYHHQDFI STTSETMMGG AAAAAPPGGG 120 GAWVEDDPSL RCVFPCEGNE RPSQGLSLSL SSSNPSAIGL QSFELRHHEN DLRASMMHDG 180 GFLGKAAAAN LNHHPSETGY FQIRNSKYLG PAQDLLNEFC CLGTSADTNH HHSAKMKLQK 240 TSQWQDNESA SSSKNPSLAS LDLLELQKRK TKLLQMLEEV DRRYKHYCDQ MKAVVSSFEA 300 VAGNGAATVY SALASKAMSR HFRCLKDGIV AQIKAIKKAT SEKDTAAPGS TKGETPRLRV 360 LDQALRQQRA FQQMTMMESH PWRPQRGLPE RSVSVLRAWL FEHFLHPYPS DVDKHILARQ 420 TGLSRSQVSN WFINARVRLW KPMVEEMYVE ETKEQENLLA TSDDNGEAAA RNLQNPRNDT 480 EDQKPNLVRI DSECISSIIN NHPAADDNKN NAGEDDHPRG GGGDHQFGPV GMDFSSYNHN 540 SAGAAFSYAA VGGSGGKNGG GGGGSVSLTL GLQQQGGSGG MGLAAAAAFS SAASQSSSSL 600 FYPRDQMEDC QTVPYSLLDS EGQNLPYRNL MGAQLLHDLA G

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MLCMAGQGEE KTRSAMVTTT GYWYADAPTN NPQIHQIHQT FDPNPEIYNL TTGMEMIGWK  60
SFFNKGAGAG AGGPGPSSSK IGLSGEPSTS HEFYHHQDFI STTSETMMGG AAAAAPPGGG  120
GAWVEDDPSL RCVFPCEGNE RPSQGLSLSL SSSNPSAIGL QSFELRHHEN DLRASMMHDG  180
GFLGKAAAAN LNHHPSETGY FQIRNSKYLG PAQDLLNEFC CLGTSADTNH HHSAKMKLQK  240
TSQWQDNESA SSSKNPSLAS LDLLELQKRK TKLLQMLEEV DRRYKHYCDQ MKAVVSSFEA  300
VAGNGAATVY SALASKAMSR HFRCLKDGIV AQIKAIKKAT SEKDTAAPGS TKGETPRLRV  360
LDQALRQQRA FQQMTMMESH PWRPQRGLPE RSVSVLRAWL FEHFLHPYPS DVDKHILARQ  420
TGLSRSQVSN WFINARVRLW KPMVEEMYVE ETKEQENLLA TSDDNGEAAA RNLQNPRNDT  480
EDQKPNLVRI DSECISSIIN NHPAADDNKN NAGEDDHPRG GGGDHQFGPV GMDFSSYNHN  540
SAGAAFSYAA VGGSGGKNGG GGGGSVSLTL GLQQQGGSGG MGLAAAAAFS SAASQSSSSL  600
FYPRDQMEDC QTVPYSLLDS EGQNLPYRNL MGAQLLHDLA G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	555	563	GGKNGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-109	TALE family protein