PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019150580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 247aa MW: 28808.9 Da PI: 10.1979 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.8 | 7e-12 | 4 | 63 | 29 | 90 |
-..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +k+ +++++l+++ ++W++++ + +++ ++++ GW +Fv++n gD++vF +d+ f XP_019150580.1 4 EKRYPRKVVLRNRMKKVWNIEI--TDTGDCCFFKHGWTKFVEDNSFINGDTLVFIYDHPAVF 63 5667889***************..9999999************************9875555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MELEKRYPRK VVLRNRMKKV WNIEITDTGD CCFFKHGWTK FVEDNSFING DTLVFIYDHP 60 AVFDFFVLDS SGCEKIIIEG EEARVKGLKN NNGNDVNFQD NAFLVEFDVN IVTQVKKDED 120 EMDVEEENND VGFQYHTSRS KRKRSITERG SKRAAREKKR DASPKKGNDG LGKKDARAKK 180 RDVSKKKKNV SVIKKRDVRD HFGVELFSSG RFAQPKNPYF VIKIRPRRPS DLYRDLLLFV 240 LQLHLKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 7e-09 | B3 family protein |