PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 155aa MW: 16921.1 Da PI: 7.0165 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 53 | 104 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++ g+WvAeIr p ng kr +lg+f ta eAa a+++a+ ++ge XP_021300468.1 53 CNYRGVRQRT-CGKWVAEIRAP--NG-GKRLWLGTFPTACEAALAYDEAATTMYGE 104 56*****999.7*********9..33.5**********************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MDQNPEVRST LSSNDTLKLW SQNEEAKQLS KTPAKGATKG CMKGKGGPQN QSCNYRGVRQ 60 RTCGKWVAEI RAPNGGKRLW LGTFPTACEA ALAYDEAATT MYGENAILNM PQSKSEDHTG 120 SCFSLRQSCQ DDAVLSMKDL PLVECEWSLV IGAVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 9e-30 | ERF family protein |