PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | TCP | ||||||||
Protein Properties | Length: 311aa MW: 33241 Da PI: 9.4774 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 126.3 | 3.2e-39 | 69 | 154 | 2 | 87 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsss 87 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a+ s+s+++ s XP_021299037.1 69 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALaAAGGSVSQQG-ASL 154 789******************************************************************99854444444443.222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MDPKGSKQPP QEVPNFLTLP PQPQQHHQHP QPQQQQQQPQ NMGENKPAEI KDFQIVIADK 60 EEGKKQQLAP KRSSNKDRHT KVEGRGRRIR MPALCAARIF QLTRELGHKS DGETIQWLLQ 120 QAEPSIIAAT GSGTIPASAL AAAGGSVSQQ GASLSAGLHQ KMEDLGGSSI GSGSSRTSWA 180 MVGGNLGRPH HVATGLWPPV SGYGFQSSSG PSTTNLGSES SNYLQKIGFP GFDLPAANMG 240 QMSFTSILGG ASQQLPGLEL GLSQDGHIGL LNPQALSQIY QQMGQARVHQ QQQQQHQQQP 300 PAKDDSQGSG Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-80 | TCP family protein |