PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298831.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 349aa    MW: 39931.4 Da    PI: 8.2823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08218263555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+e  r+RR+++ ++   L++l+P++     kK++  ++L++A +YI+ L+
  XP_021298831.1 218 HSELARKRRQKLSDKTRCLQKLMPWD-----KKMDTGTMLQEAYKYIRFLE 263
                     89999********************9.....9****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MRFMSHRDDE AGHLHSHFRF CYTQRRCYVS FCTFPLSSLN FHCYHFSVSD INSMKMERGF  60
GSTHPCYPSA FSAEFSINSS YEANFNSIFN DPNLQPLLPL PSDPSTFNFF SQDFPSLPLE  120
PQLPIPDLDS LYSSSLPPKI PDILPDSTQF LDFFNKPLPD LHSLEQPHRQ PRFTEPSASS  180
STRKLKRTRL DLNLSDNNPQ TLDSIVQSFN SPSPVIPHSE LARKRRQKLS DKTRCLQKLM  240
PWDKKMDTGT MLQEAYKYIR FLEAQVSILQ SMPISSSFAA TEHNAPVGFD YGGLGRLNRQ  300
QLLQVLVNSP VAQTMLYSQG FCVFAYEQLV SLKKAKERKA VLQQFLFGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.15e-21bHLH family protein