PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021297822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | E2F/DP | ||||||||
Protein Properties | Length: 398aa MW: 45165.5 Da PI: 9.3638 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 75.3 | 6.3e-24 | 19 | 84 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYD++N+Le+++++++k kn+++wkg XP_021297822.1 19 RKEKSLGLLCSNFLELYNHDSIQTIGLDDAASKL---GV--ERRRIYDVVNILESIGVVARKGKNQYSWKG 84 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 52 | 1.2e-16 | 189 | 254 | 16 | 71 |
E2F_TDP 16 llekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 l++ +++i+tl+++a +L+ + +++k+RR+YDi+NV++++nliek ++k+++rw g XP_021297822.1 189 LISFLQAEIITLDSAAVALLGDvhnstAMRTKVRRLYDIANVFSSMNLIEKthhpeSRKPAFRWLG 254 34445789*******************************************9999999******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MSSFLSRESE PDSRTFYCRK EKSLGLLCSN FLELYNHDSI QTIGLDDAAS KLGVERRRIY 60 DVVNILESIG VVARKGKNQY SWKGFGEIPR ALEKLKEEAL KENFYISGCN KSLRVLDENE 120 SGGSFNVKID GQDNSSESSK HIDTKREKSL WLITQNFVKL FLCSDVRKLL FNVGLLFMNC 180 LLALSGEYLI SFLQAEIITL DSAAVALLGD VHNSTAMRTK VRRLYDIANV FSSMNLIEKT 240 HHPESRKPAF RWLGWGAKLH NGSTTALALN ESKKRMFGTE IANHSLKRMK ANTSVHRKLN 300 QKENMAMHIK HECVEKDNKM EQHLKQSSRG FVFGPFTPGG MPTGNKNERP VGDWESLAST 360 YKPHYLNQAL SDLFAHYMEA WKSWYAEVAG RGETHLSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01330.1 | 1e-103 | E2F/DP family protein |