PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 223aa MW: 25540.8 Da PI: 6.807 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.5 | 2.3e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +rienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gkl e+ XP_021296597.1 9 ERIENKINRQVTFSKRRNGMLKKAYELSVLCDAEVALIIFSSRGKLSEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 58 | 4e-20 | 82 | 155 | 11 | 84 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 + ++++l+qe+ +Lk++ e+Lq +qR+llGe+Le+Ls+keL ++e+q++++l++ R+kK+ l ++ ++l+ + XP_021296597.1 82 ADETQTLYQEVLRLKAKHESLQLSQRRLLGEELEELSMKELYNIEKQVDRALTQARQKKEVELEDENKQLKSQL 155 56799*************************************************************99999765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MGRGKVVLER IENKINRQVT FSKRRNGMLK KAYELSVLCD AEVALIIFSS RGKLSEFGSS 60 TSVSQTLEKY WQHRYTSDVH FADETQTLYQ EVLRLKAKHE SLQLSQRRLL GEELEELSMK 120 ELYNIEKQVD RALTQARQKK EVELEDENKQ LKSQLELEQS FQAAQGLGDP NIEAGYEDNI 180 PPSQANHAHL PSLPQGYHQF IPQERASEAR LDKGANKPTA GWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 3e-43 | MIKC_MADS family protein |