PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | AP2 | ||||||||
Protein Properties | Length: 414aa MW: 45714.7 Da PI: 6.0252 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 167 | 216 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021295565.1 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.1 | 9.2e-13 | 259 | 309 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +++++lg f+++ eAa+a++ a+ k +g XP_021295565.1 259 SKYRGVTLHK-CGRWEARMGQY--L-GKRYIYLGLFDSEAEAARAYDMAAMKCNG 309 89********.7******5552..1.25**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MLDLNLDVVS CESSCDENKM LMNGDELPGG VTLTHMEDSG STNSSIINTE EVPSSAGDEN 60 SSNNDASAFI FDILKKETDD TIPTTTTNAE KVENPSPDFV TRQLFPVTGE KGRLELDFRA 120 SFGTKSSARP QWLNLSYAES SGEAELKTVP LKPQPRKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD INFSLSEYEE DMKQMKQMSK 240 EEFVHILRRQ STGFSRGSSK YRGVTLHKCG RWEARMGQYL GKRYIYLGLF DSEAEAARAY 300 DMAAMKCNGR EAVTNFDPST YEGEITNSLG GNSHNLDLSL GISAPSVAQN VSSNAGDFHF 360 QHAACATERP VFESSAPTST GVQPQHDLTI GSKHPPILSG VYPGLLPNNE GYRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-91 | AP2 family protein |