PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294286.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 277aa    MW: 30234.3 Da    PI: 4.7071
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.5e-3078136259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY+ eHnh+
  XP_021294286.1  78 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLVITYSCEHNHP 136
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDGSFNKANN PFVSEQQLEE NDNVSSENGA ESPPSTTFND MKLASPKKGR RSIQKRVVSV  60
PIKDVEGSRL KGESAPPSDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV  120
DPTMLVITYS CEHNHPWPAS RNNTTAAKQA AAAAAAAAAA ATATETTTTT AAKAEPSTSQ  180
PDTEQEFGTE EKFADLTDDS ILTTGDEFAW FGEMETTSST VLESPIFTER DNSVADVAMI  240
FPMREEDESL FADLGELPEC SFVFRHQRNV GPQVGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-90WRKY family protein