PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293534.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Nin-like
Protein Properties Length: 270aa    MW: 30726.3 Da    PI: 9.5957
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.93.6e-27179228251
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                     + +++l+d++kyF+lpi++AA++L++++TvLK+iCR+yG+ RWPhRki+s
  XP_021293534.1 179 TRNLTLKDIEKYFHLPIEEAARSLDLSVTVLKKICRRYGVLRWPHRKIQS 228
                     689*********************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MNNPTETNMG TESLNFENSM PLSVWPIGPV PFGCSCCQVL REIVHTNGIN VTKLEIHGRL  60
GIICHAILTD RSGSTNAVAP GHQYQMFDFC KKSIEYVKQF LSQYCFHRSQ TGYVIVQDPL  120
SGFYEALCVG FLWDENFKNG DFMQPSSSHA GGFRMDQPGN SNNRGKHPKP SLSIQRERTR  180
NLTLKDIEKY FHLPIEEAAR SLDLSVTVLK KICRRYGVLR WPHRKIQSME KQIVLWTGKL  240
NSNDPEERDR AAKIILKLQR GITKIRGGAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-13Nin-like family protein