PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021293364.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 312aa MW: 34894.6 Da PI: 7.4458

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021293364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.4	3.2e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ XP_021293364.1 19 PRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	51.3	2.7e-16	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+++lGg t+k++ + m kg+t ++ks++q+y+ XP_021293364.1 20 RLRWTPELHHCFVHAIERLGGQdkaTPKLVLQLMDvKGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MGSCGRSGAV RQYIRSKVPR LRWTPELHHC FVHAIERLGG QDKATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRSDLGRQ DRSSTHQRRQ SFENHDGCVD EVGDMGFHST SKPIEESDSH 120 LIYSPPPSKR ARIETRSSIS DQNLQCSQGI CETVSNPYSF DDYLQTMAVH KGIKEGNGAF 180 IWEHTQSHSQ GQSTTFSLPY DLYNLNSFKY SMEESDFLKV AKVEAEDHHT HVERTVRRRA 240 GDKEEVGGGC ELSLSLSLHH PSSQKSNTSS TSEISSSEAF SSYSRSNYKD CSGTSSAQRS 300 VNLDLSIALC GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	3e-35	G2-like family protein