PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293342.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 595aa MW: 63572.4 Da PI: 9.3067 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3.1e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_021293342.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021293342.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence |
MAAASSSTPF FGTREENQTQ MIQQQSSSTP TSSTAPTTAP QKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPNNLS TMGSHLFGSN HMSLGLSQVG SQIPSLQDQN 240 QPPSNMLRLG SAGAAKFEHL IPPSNPSPLQ NMPTSAFFMP DANQGFHHQD HQSHHGHGPF 300 LNKPLHGLMQ LPDLQGNTNN TPVSTNLFNL GFFPNNSAAS SISTSENASA STANLPNSGF 360 LSPNQFNSGN GGGGGQGTAM FSTNMGDQVG SGLSSLYSTS MQHENISPHM SATALLQKAA 420 QMGSTTSNNT SSLLRGLGNS SASGTKSDRP VLSANFGSNY GGGGGGETLR SQMENDSNLQ 480 GLMNSLANGN SSIFGAGHGQ DSNFGGFSGS GMTPAQQSNN ANFCNVNEAK LHENLAASIG 540 GTDKLTLDFL GVGGMVRSMG GGFSQREPHG INISSLDPEV NSAQANQQFG SAKLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-132 | C2H2 family protein |