PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021292369.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 424aa MW: 46612.5 Da PI: 7.942

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021292369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.5e-32	242	295	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_021292369.1 242 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 295 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.4e-15	243	294	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_021292369.1 243 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 294 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MSHKGGFSKQ SLNRIPDLSL HISPPNSAPS SICTDTNEGD SSFDIWRKDD GLKSHSDSSI 60 KAGSQADTEL SLANPASSAL EAESPWQRNF AGGVTDDDQI RHRNLLKCGN TNSGQPSNIN 120 HGISLLDVSG LKPIKGIPVY NNSLSFPFSS SDSFVDMDPN KLRFYHQSCP SYNCSSSTSA 180 VLHSPDAYRI GSAPRFNGIS METLRPQFHH QYSQYGAADL CNGMIRSRFM PKLQSKRTMR 240 APRMRWTSSL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKSTD 300 KPAASSDGSG EDDYLPARNT ISQIANCSLN QRSSASPNLS IQQDNGHSPT NLWSNSSSRG 360 VWLSSSRNPD GFRPDAPSSQ PGNQFEESSF AKQKILTESS LELHNPSLDF SLGRPDWQSK 420 ERDS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MSHKGGFSKQ SLNRIPDLSL HISPPNSAPS SICTDTNEGD SSFDIWRKDD GLKSHSDSSI  60
KAGSQADTEL SLANPASSAL EAESPWQRNF AGGVTDDDQI RHRNLLKCGN TNSGQPSNIN  120
HGISLLDVSG LKPIKGIPVY NNSLSFPFSS SDSFVDMDPN KLRFYHQSCP SYNCSSSTSA  180
VLHSPDAYRI GSAPRFNGIS METLRPQFHH QYSQYGAADL CNGMIRSRFM PKLQSKRTMR  240
APRMRWTSSL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKSTD  300
KPAASSDGSG EDDYLPARNT ISQIANCSLN QRSSASPNLS IQQDNGHSPT NLWSNSSSRG  360
VWLSSSRNPD GFRPDAPSSQ PGNQFEESSF AKQKILTESS LELHNPSLDF SLGRPDWQSK  420
ERDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	6e-58	G2-like family protein