PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291618.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 183aa    MW: 20611.8 Da    PI: 5.3029
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000173456123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H++ H
  XP_021291618.1 34 YECTFCRRGFTNAQALGGHMNIH 56
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MESGKQGSSD ASSEENDRVD RVKGDTAATT KRSYECTFCR RGFTNAQALG GHMNIHRKDR  60
AKAKQPTSSS VPSEPMNEDY MNPGYLPPIS TEPPNYYPVL EAQRNYHMYF QPPVSSPTLP  120
YGYYESDFLV PARSQSLSMN DEELLGANLS LQIGPTHVDD REVRRGIMKE DELDLELRLG  180
HHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.11e-18C2H2 family protein