PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 196aa MW: 22841.4 Da PI: 10.8668 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.6 | 4.7e-05 | 133 | 156 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C Cg++F +++ L +H + H XP_021291496.1 133 YFCRVCGRRFYTNEKLINHFKQiH 156 78*****************98767 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MLHKFPNIFN SIQSTRIKAL NPWNSLYRYC HFKKKVGFDS LNSTSTLASK TAQNSVAIFW 60 DLDNKPPNSF PPFEAAIKLK TAASSFGVVR SMVAYANHHA FGYVPKVVRE QRKERKLLNQ 120 LENKGVIKSV EPYFCRVCGR RFYTNEKLIN HFKQIHEREH QKRLNQIESA RGSRRVKLVA 180 KYSMKMEKYK NAARDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12240.1 | 2e-77 | C2H2 family protein |