PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | TCP | ||||||||
Protein Properties | Length: 392aa MW: 42841.8 Da PI: 7.1336 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 70.1 | 7.3e-22 | 34 | 89 | 3 | 58 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 ++++ + ++hTkv+gRdRR+R++++c +F L++e G+ + ++ti+WLlqq+ p XP_021290068.1 34 KRRRYKGDRHTKVEGRDRRIRIPLTCCSGVFRLTREMGHQTHGQTIQWLLQQSRPD 89 4666788**********************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence |
MDSQTQTLDR QQQSFHPGNA KQEAGTLSLR PSKKRRRYKG DRHTKVEGRD RRIRIPLTCC 60 SGVFRLTREM GHQTHGQTIQ WLLQQSRPDL LLPDPMSCPS RLIGSAPDCM AKGRVRATVV 120 QASTVFLDTP ATLDKAERLI AGAAAYGSQL VVFPEAFVGG YPRGVSFEAV AVPSSTEDNE 180 VFLKYHASTI EVPGPEVDRL AKIAVWCCGE KSSLPLYGTT IGKVGGLLYW DNRIPSLRTQ 240 LYAKGIEIYC APTADAREEW RASMIHIAIE GRCFVLSANQ FCQRKDYPLP LKCIDGDSNC 300 DLSLDTVICS GGSVIVSPSG TILAGPNYHG ESLISADLDL EEITRAKLEV SETGHIVGPD 360 SVGWTANRPN PVLFPTAVKT EALDELSWSP GL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 3e-18 | TCP family protein |