PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290068.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family TCP
Protein Properties Length: 392aa    MW: 42841.8 Da    PI: 7.1336
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP70.17.3e-223489358
             TCP  3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58
                    ++++ + ++hTkv+gRdRR+R++++c   +F L++e G+ + ++ti+WLlqq+ p 
  XP_021290068.1 34 KRRRYKGDRHTKVEGRDRRIRIPLTCCSGVFRLTREMGHQTHGQTIQWLLQQSRPD 89
                    4666788**********************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MDSQTQTLDR QQQSFHPGNA KQEAGTLSLR PSKKRRRYKG DRHTKVEGRD RRIRIPLTCC  60
SGVFRLTREM GHQTHGQTIQ WLLQQSRPDL LLPDPMSCPS RLIGSAPDCM AKGRVRATVV  120
QASTVFLDTP ATLDKAERLI AGAAAYGSQL VVFPEAFVGG YPRGVSFEAV AVPSSTEDNE  180
VFLKYHASTI EVPGPEVDRL AKIAVWCCGE KSSLPLYGTT IGKVGGLLYW DNRIPSLRTQ  240
LYAKGIEIYC APTADAREEW RASMIHIAIE GRCFVLSANQ FCQRKDYPLP LKCIDGDSNC  300
DLSLDTVICS GGSVIVSPSG TILAGPNYHG ESLISADLDL EEITRAKLEV SETGHIVGPD  360
SVGWTANRPN PVLFPTAVKT EALDELSWSP GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.13e-18TCP family protein