PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | E2F/DP | ||||||||
Protein Properties | Length: 259aa MW: 28970.6 Da PI: 7.542 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 71.9 | 7.3e-23 | 61 | 140 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +Lr+++ + +++k e+ g +t+ eva+e+++e ++kn rRR+YD+lNVL+al++i++ ek+eirwkg XP_021289601.1 61 GGLRQFSVM---VCKKLESkGSTTYAEVADEIIEEfataqtntarsldefHEKNVRRRVYDALNVLMALDIITR-EKKEIRWKG 140 589999999...****9999******************************999*********************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDNPYLEDSP SCEQSPVATP SNASTSGSAC GMNQSAVKQK NASADVVDGT MRKKVSRMPG 60 GGLRQFSVMV CKKLESKGST TYAEVADEII EEFATAQTNT ARSLDEFHEK NVRRRVYDAL 120 NVLMALDIIT REKKEIRWKG LSTTTQAKSL EELKALHVQL MARIAKKAAY LKDVEEQTSP 180 HATVEIEISE DMQLVHLDFN STPFSLHDDA YVLKLMRYYQ RPESRNTSQS SSIHSSSSSC 240 KATRVSKPFY WNSETETPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02470.3 | 1e-71 | E2F/DP family protein |