PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289341.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 592aa MW: 65872.8 Da PI: 8.1294

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.5	1.1e-06	244	301	1	58
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk e ke+++ XP_021289341.1 244 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 301 799******************************************9544444455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEQD RAAVDQQQSQ VTSTPVIIDS 120 IEAEQDSELL NGTHPCAARY TSKCVVKSRQ NAEKETLRLH RMFTNKESDW QMIRERQILF 180 SIMGMPEKDV WEDGQHDQMT GNDLLIKSVK AERNAESVKS SPTCATKYTS GGGGRSRQNL 240 TEAEKEARRL RRILANRESA RQTIRRRQAL CEKLTLKVAD LTRENENLKR AKELALKEYK 300 SQESTNKHLK AQMVKAIKAE EGQAPRELKL AHQTSGPSRN YPFYFYNQHP FSPFCWPSIV 360 QSSNPVQTQC GHQIPIVVPS SVSAPTNGRL DSSHDQENPI NNNGPKSPLY VVPYPWFFSL 420 PDHGNELHPQ PSFGPKNNKD ETSANNRLCS LKSVVHEEKY NFSLPTEVEK EAYGSIEASS 480 NNQNCTSVRL PSDGSGQCIR YQIKEEVILP TPLCSAGATF VVEQDKMPDV NTEAARVRAC 540 HFVGALQEEN QESTNYTSKK VLDAAAAAEA RKRRKELTKL KNLHGRQCRT HR

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK  60
WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEQD RAAVDQQQSQ VTSTPVIIDS  120
IEAEQDSELL NGTHPCAARY TSKCVVKSRQ NAEKETLRLH RMFTNKESDW QMIRERQILF  180
SIMGMPEKDV WEDGQHDQMT GNDLLIKSVK AERNAESVKS SPTCATKYTS GGGGRSRQNL  240
TEAEKEARRL RRILANRESA RQTIRRRQAL CEKLTLKVAD LTRENENLKR AKELALKEYK  300
SQESTNKHLK AQMVKAIKAE EGQAPRELKL AHQTSGPSRN YPFYFYNQHP FSPFCWPSIV  360
QSSNPVQTQC GHQIPIVVPS SVSAPTNGRL DSSHDQENPI NNNGPKSPLY VVPYPWFFSL  420
PDHGNELHPQ PSFGPKNNKD ETSANNRLCS LKSVVHEEKY NFSLPTEVEK EAYGSIEASS  480
NNQNCTSVRL PSDGSGQCIR YQIKEEVILP TPLCSAGATF VVEQDKMPDV NTEAARVRAC  540
HFVGALQEEN QESTNYTSKK VLDAAAAAEA RKRRKELTKL KNLHGRQCRT HR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	571	576	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-55	bZIP family protein