PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289340.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 602aa MW: 67042.1 Da PI: 7.9704

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.2	1.5e-07	243	289	1	47
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk XP_021289340.1 243 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKR 289 799***************************************99984 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEDR AAVDQQQSQV TSTPVIIDSI 120 EAEQDSELLN GTHPCAARYT SKCVVKSRQN AEKETLRLHR MFTNKESDWQ MIRERQILFS 180 IMGMPEKDVW EDGQHDQMTG NDLLIKSVKA ERNAESVKSS PTCATKYTSG GGGRSRQNLT 240 EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRL IHFDCIPTEK 300 AKELALKEYK SQESTNKHLK AQMVKAIKAE EGQAPRELKL AHQTSGPSRN YPFYFYNQHP 360 FSPFCWPSIV QSSNPVQTQC GHQIPIVVPS SVSAPTNGRL DSSHDQENPI NNNGPKSPLY 420 VVPYPWFFSL PDHGNELHPQ PSFGPKNNKD ETSANNRLCS LKSVVHEEKY NFSLPTEVEK 480 EAYGSIEASS NNQNCTSVRL PSDGSGQCIR YQIKEEVILP TPLCSAGATF VVEQDKMPDV 540 NTEAARVRAC HFVGALQEEN QESTNYTSKK VLDAAAAAEA RKRRKELTKL KNLHGRQCRT 600 HR

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK  60
WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEDR AAVDQQQSQV TSTPVIIDSI  120
EAEQDSELLN GTHPCAARYT SKCVVKSRQN AEKETLRLHR MFTNKESDWQ MIRERQILFS  180
IMGMPEKDVW EDGQHDQMTG NDLLIKSVKA ERNAESVKSS PTCATKYTSG GGGRSRQNLT  240
EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRL IHFDCIPTEK  300
AKELALKEYK SQESTNKHLK AQMVKAIKAE EGQAPRELKL AHQTSGPSRN YPFYFYNQHP  360
FSPFCWPSIV QSSNPVQTQC GHQIPIVVPS SVSAPTNGRL DSSHDQENPI NNNGPKSPLY  420
VVPYPWFFSL PDHGNELHPQ PSFGPKNNKD ETSANNRLCS LKSVVHEEKY NFSLPTEVEK  480
EAYGSIEASS NNQNCTSVRL PSDGSGQCIR YQIKEEVILP TPLCSAGATF VVEQDKMPDV  540
NTEAARVRAC HFVGALQEEN QESTNYTSKK VLDAAAAAEA RKRRKELTKL KNLHGRQCRT  600
HR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	581	586	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	5e-48	bZIP family protein