PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | TCP | ||||||||
Protein Properties | Length: 214aa MW: 23129.9 Da PI: 6.849 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.1 | 7.7e-35 | 48 | 116 | 8 | 73 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...sec 73 ++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg+++ +a +c XP_021289254.1 48 SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGTVPAaheISC 116 79********************************************************55555332333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MGSEMALHKF STANHNHQNS NINSVVSDES TPKTQLALPT RKPVSSLSKD RHTKVNGRGR 60 RVRMPALCAA RIFQLTRELG HRSDGETIEW LLRQAEPSII AATGSGTVPA AHEISCPAGP 120 TTTSASPPSV SCQVHPVGVG SGSVVAGMYT MTAPPPNCRL DLCQPVGFQY SAVGRSGYQH 180 MPFTALLLQP TTAAEEVEER QQVEDEEEEI RHHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 6e-46 | TCP family protein |