PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289196.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 430aa MW: 47120.6 Da PI: 8.8176

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7.2e-33	152	208	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k XP_021289196.1 152 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHSK 208 9*************************************.*************85 PP
2	WRKY	106.3	1.6e-33	349	406	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver+++dp+++++tYeg+Hnhe XP_021289196.1 349 GDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKHVERASDDPRAFITTYEGKHNHE 406 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MEVKEAERIV IAKPVASKPT CSSFKSFSEL LAGAINASPP NASSETAVPA IRPKTVRFKP 60 AVNHAPSAVA SSQGNFSTRN QPTLQSTEAP AQHTNQEKKN FRSQVCPNFH QNTPSHAETD 120 QTSERSKVGS QNMEEDPKSL PAAANIDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHPN 180 CPVKKKVERS FDGQIAEIVY KGEHNHSKPQ PPKRNSSGTQ GLGSASDGTG QDTNNSLWSN 240 NPNERNEGSD GRVENQNEVG LSAPPSYQGK AVLSYEHVST GAVNAGVTSE NSIGLSGECE 300 EQSKEGEDDE PRSKRRKGEN QSSEVGTSGE GIQEPRVVVQ SCTDSEIMGD GFRWRKYGQK 360 VVKGNPYPRS YYRCTSLKCN VRKHVERASD DPRAFITTYE GKHNHEMPLR NTNPVASDPD 420 SNSAASKGKR

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MEVKEAERIV IAKPVASKPT CSSFKSFSEL LAGAINASPP NASSETAVPA IRPKTVRFKP  60
AVNHAPSAVA SSQGNFSTRN QPTLQSTEAP AQHTNQEKKN FRSQVCPNFH QNTPSHAETD  120
QTSERSKVGS QNMEEDPKSL PAAANIDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHPN  180
CPVKKKVERS FDGQIAEIVY KGEHNHSKPQ PPKRNSSGTQ GLGSASDGTG QDTNNSLWSN  240
NPNERNEGSD GRVENQNEVG LSAPPSYQGK AVLSYEHVST GAVNAGVTSE NSIGLSGECE  300
EQSKEGEDDE PRSKRRKGEN QSSEVGTSGE GIQEPRVVVQ SCTDSEIMGD GFRWRKYGQK  360
VVKGNPYPRS YYRCTSLKCN VRKHVERASD DPRAFITTYE GKHNHEMPLR NTNPVASDPD  420
SNSAASKGKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-103	WRKY family protein