PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021287432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 24748.2 Da PI: 9.7696 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88 | 5.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n+ rqvtfskRr g++KKA+ELS+LCdae+a+++fs tgkl+eyss XP_021287432.1 9 KKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 52.7 | 1.9e-18 | 86 | 171 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + +a L kei + re R+l Ge+L+ L+l+eL++Le+ L+ +l+++ ++K+e +l++i++l++k +l een++L++++ XP_021287432.1 86 EMQIESSAHAMLGKEIAEKTREMRQLRGEELQGLNLEELKHLEKLLDAGLSRVTETKDERFLKEISNLKRKGAKLMEENQQLKQQI 171 566667778889999999999***************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MTRQKIQIKK IDNTAARQVT FSKRRRGLFK KAHELSTLCD AEIALVVFSA TGKLFEYSST 60 STGQVIERRN LQSERINGLD RVPSLEMQIE SSAHAMLGKE IAEKTREMRQ LRGEELQGLN 120 LEELKHLEKL LDAGLSRVTE TKDERFLKEI SNLKRKGAKL MEENQQLKQQ IGNSSMDQAI 180 VPQQGQSSES TAHVWISADP PQGYNNSDIS LRLGLPFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 4e-66 | MIKC_MADS family protein |