PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287140.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Nin-like
Protein Properties Length: 305aa    MW: 35101.5 Da    PI: 5.0203
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.93.2e-26143191452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +s +++s+yF+lpi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_021287140.1 143 MLSRKVISQYFYLPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 191
                     68999*****************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGSHYSFNGW SKSELVAKEE ETSPFPTQLP LDSSASVYYN SVDWQNEFPI QESFFDALPL  60
MSSFYTDPLY DSLDFEKSSS LTRDHLTIVA ENNLLGCEKG SGFWNELGAL FKPNAKNEDV  120
GEELKGERSA KRCREEKCSS STMLSRKVIS QYFYLPITQA AKELNVGLTL LKKRCRELGI  180
RRWPHRKLMS LQTLIRNVQE LQKEEGEESE RKLREAVEVL ERERKLLEEM PDLQLEDKTK  240
RLRQACFKAN YKKRKLMMME SQSSSGGSRE SLDLTRGYDV ENEEDEGEMK SLLSDAFSST  300
NTMAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-43Nin-like family protein