PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286692.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family BBR-BPC
Protein Properties Length: 310aa    MW: 34690.6 Da    PI: 9.8892
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind356.55.5e-10913101301
       GAGA_bind   1 mdddgsre..rnkg.yye................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalve 76 
                     md  g++e  r k  yy+                ++++l   +++++ms++aerda+irern+a+sekk+a+a+rd+a++qrdkalaer+ al++
  XP_021286692.1   1 MDGAGQQEsgRYKLdYYKgahtpwnmmpqhhmkeQNNALV--MNKKIMSILAERDAAIRERNIAISEKKEALAARDEALQQRDKALAERDSALMD 93 
                     7777877777877778889999999996555532224444..899************************************************** PP

       GAGA_bind  77 rdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
                     rdn+l+ l+++en++  + p g+++ +g k ++   + + ++++++  +  e++ ++alp+++ a e+ +++ +k+++++k   +k a+k+kk  
  XP_021286692.1  94 RDNALAVLQYRENAM--NFPLGSGIQRGGKRMH--PTYHSTDVGETLNG--EMHVTDALPVSTIACEEGKSRPVKRTKENKAVSSKSARKVKKVA 182
                     *************95..568899999****999..44457788887777..************************99999999999999****99 PP

       GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafk 266
                     e+ +++  +e   ++ k+e++ +d++ln v++De+t+PvPvCsCtG++rqCYkWGnGGWqS+CCttt+S yPLP+++++r+aR++grKmS+++f+
  XP_021286692.1 183 EDLNRQAGTEV--KKCKSEWNGQDIGLNMVNFDETTMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTTMSSYPLPQMPNKRHARVGGRKMSGSVFT 275
                     99999999998..57******************************************************************************** PP

       GAGA_bind 267 klLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     klL++LaaeG dls p+DLk++WA+HGtn+++ti+
  XP_021286692.1 276 KLLSRLAAEGQDLSIPLDLKNYWARHGTNRYITIK 310
                     **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDGAGQQESG RYKLDYYKGA HTPWNMMPQH HMKEQNNALV MNKKIMSILA ERDAAIRERN  60
IAISEKKEAL AARDEALQQR DKALAERDSA LMDRDNALAV LQYRENAMNF PLGSGIQRGG  120
KRMHPTYHST DVGETLNGEM HVTDALPVST IACEEGKSRP VKRTKENKAV SSKSARKVKK  180
VAEDLNRQAG TEVKKCKSEW NGQDIGLNMV NFDETTMPVP VCSCTGVPRQ CYKWGNGGWQ  240
SSCCTTTMSS YPLPQMPNKR HARVGGRKMS GSVFTKLLSR LAAEGQDLSI PLDLKNYWAR  300
HGTNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-138BBR-BPC family protein