PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 371aa MW: 42607.6 Da PI: 6.3814 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.0005 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_021286215.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP | |||||||
2 | zf-C2H2 | 17.3 | 1.3e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_021286215.1 106 YVCHweGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 20.7 | 1.1e-06 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nL++H++tH XP_021286215.1 136 FICPheGCGKAFSLDFNLRSHMKTH 160 78**********************9 PP | |||||||
4 | zf-C2H2 | 17.8 | 9.3e-06 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_021286215.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP | |||||||
5 | zf-C2H2 | 15.2 | 6e-05 | 229 | 254 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C k + + + Lk H+r+ H XP_021286215.1 229 YVCPyeGCEKAYIHEYKLKLHLRReH 254 99**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MEMQFPHNLF ERRPILKSRA PAVKWFKEWV PQDVVATGGK CMILKWVNEN TLKALKEKEK 60 EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHW EGCGKKFLDS 120 SKLKRHFLIH TGERDFICPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKSTTADVP KYATPTEKIT KTPKPSGGAY GSASSDRPYV CPYEGCEKAY 240 IHEYKLKLHL RREHPGHMSD ENVENATPNA DNEMDEASDQ DAYAGKRVNG KSQKQQSRAK 300 PNVKMPPAKI ARKKGSSPVT LPVPKKQWPV KEEVYEEEDS EETEEDRENV EDGWTYADNN 360 EDDDEETEYE D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-144 | C2H2 family protein |