PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286153.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 345aa    MW: 38115.5 Da    PI: 6.8932
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-0861108354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL+ + + +k+L
  XP_021286153.1  61 LQKADREKLRRDRLNEHFLELGNALDPD----RPKNDKATILTDTLQLLKDL 108
                     56778********************997....79***********9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MDQLKNDAAA FVQSIQSSNP SIIEFRQPPI DPRVPSTTRT QPKSSQRVEG EAKDFLAARK  60
LQKADREKLR RDRLNEHFLE LGNALDPDRP KNDKATILTD TLQLLKDLTS QVTKLKAEYA  120
MLTEESRELT QEKNDLKEEK ASLKSDIDNL NIQYQQRVRT LFPWGTVDHS VVMAPPSYPF  180
PVPMAMPPPG AITMHPSMQP FSFFGSQNPG VIHNPCSTFV PYMTPNTMDE QQSMQHVAPL  240
AQPGSQSHAS GKQDSKNKSS GESKVEKTVD SNDVATDLEL KTPGSTADQD LSLGQRKLKK  300
SLRKENSNTE GSYSSRCSSS HSAQDSSSTS IVGGRKADDL DGGKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-82bHLH family protein