PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286148.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 289aa MW: 31791.8 Da PI: 6.5026

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23	1.7e-07	85	134	2	51
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +e k +r NReA r++R++ ka+ + Le++v L a N++L k+l+ XP_021286148.1 85 REKKSKKRPLGNREAVRKYREKVKARAASLEDEVVRLRALNQQLLKRLQG 134 5678899999***********************************99974 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MDDGELDFSN QEVFSGNMAD IPSSCSMDSF FDELLNDSHA CTHTHTCNPP GPDNSHTHTC 60 FHVHTKIVPA PTEDTAAIDD TAESREKKSK KRPLGNREAV RKYREKVKAR AASLEDEVVR 120 LRALNQQLLK RLQGQAALEA EIARLKCLLV DIRGRIEGEI GSFPYQKSTT NVNMMNLPGA 180 YVMNPCNVQC NDQMYCLHPG PEVKTGEAAE LNGQGFNGCE FDNLPCFANQ NSGEKELSTY 240 GVGSAGSNGN SSGTKRRKGV AWLGFDAISG LLSLWFKAYK LVKLKLMDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	285	KRRKGVAWLGFDAISGLLSLWFKAYKLVKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	1e-110	bZIP family protein