PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021285189.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 381aa    MW: 41666.3 Da    PI: 4.8478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021285189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-103073471055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_021285189.1 307 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 347
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MESLAAFPDG EWDSINRMFS TEELDLTQQI LHQFSFPLEH DEGLSFINSS TFCPISEANM  60
CIAGVTENLP YSSNAIDSNF HYNSQESSQS SNSSGSVFVS PPNLETYCLS GSNHVAVTND  120
ITMSSLDISM DIGGVSDKIT GSFPPVFPNL AREDTVNVIE DLSSDSLGKL LDASHPSANT  180
VLANELLLKR KFDVLELHAE GDKMNINSNS SEHAKRRPRV SKDAAKVYKN VQSKKNRKIS  240
LNGNEGESNI GSDGQSSSTC SSEDDIVSQD TNGVAASDSK ASQALNLNGK TRASRGSATD  300
PQSLYARKRR ERINERLRIL QNLVPNGTKV DISTMLEEAV HYVKFLQLQI KLLSSDDLWM  360
YAPIAYNGID IGLNKKISTL L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-46bHLH family protein