PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021285062.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 795aa    MW: 89452.2 Da    PI: 8.898
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021285062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.12.9e-1715100899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +++++ +rl +p  f ++ +g +++s  + l+ +sg sW v+l   +k++  ++ +GW +Fv+++ ++ gDf+vF++dg+  f   vkvf++
  XP_021285062.1  15 PSTSSVNRLKIPVGFNRNLEGRTTGS--VLLRGPSGYSWVVEL--VRKDDDLFFDEGWADFVRDHSVECGDFLVFRHDGDLVF--DVKVFDQ 100
                     66777799********9889998886..***************..9999***************************9887666..9999987 PP
2B352.11.2e-16230323298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + ++++ +v+ s  l +p +fa eh   ++++++++l++++g  W+v+    ++   +++l +GW +Fv++n++k+gD+++F++++  +fel+v+
  XP_021285062.1 230 VRIMKRFNVSGSYTLNIPYQFAMEHL--PKCKTEIVLRNLKGACWTVNSVPtTRVHTSHTLCGGWLGFVRSNEIKVGDICIFEFVR--KFELRVH 320
                     56667777888899********9996..34889***************954566666799***********************876..999**** PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_021285062.1 321 ILR 323
                     998 PP
3B350.44.1e-16439526497
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     ++ + +v+ s  l +p kfa+++++k   + t+tl+ +sg  W+v l  +  +++ ++  GWk Fv+++ L e+D ++Fk++g s f   v +f
  XP_021285062.1 439 IMRKFNVGGSYTLEVPEKFAKNIKQK--LPATVTLKGPSGIIWDVGL--KADGNTLFFDCGWKIFVEDHSLVENDLLIFKYNGMSHF--DVLMF 526
                     56666788888999******888755..899****************..999999**************************997777..56555 PP
4B347.92.4e-15683765186
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f  v++p +v ++  + +p   +++h +k++e  +++    + ++W+ ++ y ++++   l++GW++Fv++n+L+e D +vF+  +
  XP_021285062.1 683 FMVVMKPTHVARRFYMAIPTAWVAKHLSKQNE--DVI-LRINKQTWKARFYYHRNRDCGGLSGGWRNFVNDNNLDEDDACVFEPAD 765
                     77899*********************666444..455.456889******88555555579**********************543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MLKLRRRPHF VNVFPSTSSV NRLKIPVGFN RNLEGRTTGS VLLRGPSGYS WVVELVRKDD  60
DLFFDEGWAD FVRDHSVECG DFLVFRHDGD LVFDVKVFDQ SSCEKEAAFH CKCSQGGSEY  120
DRIVGQKRGR EDEGVSLDQD CEGLVKRTRE SSSEFDRDVG DKEHCGYELL LATKTCRGLA  180
SCDENHEGTI LKKTGTQDLN LHGGGCTPMV AEFEEKKVAQ SFNSSFPFFV RIMKRFNVSG  240
SYTLNIPYQF AMEHLPKCKT EIVLRNLKGA CWTVNSVPTT RVHTSHTLCG GWLGFVRSNE  300
IKVGDICIFE FVRKFELRVH ILRVGGEDPD RQSGKAGSNV LINRSDATLP KKFVKKSSKV  360
HSKSMKKVQM CDNKGFKMLD KKKYGNAAKK SASVALCSLS RSGNEKQEAA IGGLRMMLAL  420
DEEKAAQSFA SGFPSFVRIM RKFNVGGSYT LEVPEKFAKN IKQKLPATVT LKGPSGIIWD  480
VGLKADGNTL FFDCGWKIFV EDHSLVENDL LIFKYNGMSH FDVLMFDGRS LCEKAASYFV  540
RKCEHTEYDS RCQTKRKMNE TPVEIVHNSS HCGLESSPEK SINNDIETRP SRQPITSAAT  600
NKKMRIMGSS TRSVPARKSL RGKDLTTFAA EVKVETGDLE FDQTSMDGDV FSPRYTTGKR  660
PATQVEKANV FLMAQEALTR EGFMVVMKPT HVARRFYMAI PTAWVAKHLS KQNEDVILRI  720
NKQTWKARFY YHRNRDCGGL SGGWRNFVND NNLDEDDACV FEPADVGNKP MILDVSIFRV  780
LQAPVPLTQV HPALY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-64B3 family protein